Han Zhang, Xueting Huo, Xia Guo, Xin Su, Xiongwen Quan, and Chen Jin, A Disease-related Gene Mining Method Based On Weakly Supervised Learning Model，2018 BIBM, regular paper.
Han Zhang, Tanner Yohe, Le Huang, Sarah Entwistle, Peizhi Wu,Zhenglu Yang, Peter Busk, Ying Xu, Yanbin Yin. dbCAN2: a meta server for automated carbohydrate-active enzyme annotation. Nucleic Acids Research(2018 Web Server-Issue), https://doi.org/10.1093/nar/gky418.SCI一区，2017影响因子10.16
Xue Jiang, Han Zhang*, Zhao Zhang, and Xiongwen Quan. Flexible Non-negative Matrix Factorization to Unravel Disease-related Genes. IEEE/ACM Transactions on Computational Biology and Bioinformatics, (通讯作者),doi： 10.1109/TCBB.2018. 2823746, SCI二区
Haidong Yi, ayush.raman, Han Zhang*, Genevera Allen,Zhandong Liu*. Detecting hidden batch factors through data adaptive adjustment for biological effects. Bioinformatics ,2017, (通讯作者),doi: 10.1093/bioinformatics/btx635 ,SCI一区，2017影响因子7.30
Xue Jiang, Han Zhang, Feng Duan, Xiongwen Quan.Identify Huntington's disease associated genes based on restricted Boltzmann machine with RNA-seq data. BMC Bioinformatics, December 2017, 18:447 , SCI二区
Huang, Le; Zhang, Han*; Wu, Peizhi; Entwistle, Sarah ; Li, Xueqiong; Yohe, Tanner ; Yi, Haidong; Yang, Zhenglu; Yin, Yanbin*. dbCAN-seq: a database of carbohydrate-active enzyme (CAZyme) sequence and annotation. Nucleic Acids Research,doi:10.1093/nar/gkx894 , (通讯作者)SCI一区，2017影响因子10.16
Xue Jiang, Han Zhang*, Xiongwen Quan and Yanbin Yin .A Heterogeneous Networks Fusion Algorithm Based on Local Topological Information for Neurodegenerative Disease. Current Bioinformatics,Vol. 12, No. 5, 2017.SCI
Xin Su, Bo Zhao, Yi Gong, Han Zhang*. The prediction method for folding boundaries of Escherichia coli chromosome based on multi-source information. Chinese Control Conference (CCC), 2017
Xin Su, Bo Zhao, Yi Gong, Han Zhang*. The prediction method for folding boundaries of Escherichia coli chromosome based on multi-source information. Chinese Control Conference (CCC), 2017
Xue Jiang, Han Zhang* and Xiongwen Quan, Meta-analysis for Feature Selection Based on Gene Co-expression Network, BioMed Research International,2016. SCI
Lingyue Xie, Han Zhang*, Feng Duan. A feature extraction method based on dictionary learning for EEG, 11th International Conference on Natural Computation, ICNC 2015, Zhangjiajie, 2015.8.15-2015.8.17
Qin Ma, Yanbin Yin, Mark A. Schell, Han Zhang, Guojun Li,and Ying Xu*,Computational analyses of transcriptomic data reveal the dynamic organization of the Escherichia coli chromosome under different conditions,Nucleic Acids Research ,2013, 1–10 doi:10.1093/nar/gkt26
Zhang, H.*, Yanbin Yin*, Olman, V. and Xu, Y. (2012) Genomic arrangement of regulons in bacterial genomes. PLoS ONE, 10.1371/journal.pone.0029496
Xizeng Mao, Han Zhang, Yanbin Yin, and Ying Xu. The percentage of bacterial genes on leading versus lagging strands is influenced by multiple balancing forces. Nucleic Acids Research, 2012, 1–9 doi:10.1093/nar/gks605，June 26, 2012, SCI一区，2011影响因子8.02
Yanbin Yin*, Zhang H.*, Olman, V., Xu, Y. (2010) Genomic arrangement of bacterial operons is constrained by biological pathways encoded in the genome. Proc Natl Acad Sci USA 107(14): 6310-6315 PubMed (*equal contribution),《美国国家科学院院刊》,PNAS,并列第一作者, PubMed, http://www.ncbi.nlm.nih.gov/pubmed/20308592,SCI一区,2010年影响因子9.771，检索号00027637440003